STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc21g20230Pc21g20230 protein; Belongs to the SKP1 family. (101 aa)    
Predicted Functional Partners:
Pc20g00850
Pc20g00850 protein.
   
 0.988
Pc13g04600
Pc13g04600 protein.
    
 0.987
Pc13g04610
Pc13g04610 protein.
   
 0.960
Pc20g09180
Pc20g09180 protein.
    
 0.956
Pc16g02300
Pc16g02300 protein.
     
 0.945
Pc21g01770
Pc21g01770 protein.
   
 0.916
Pc20g09960
Pc20g09960 protein.
    
  0.895
Pc12g03060
Pc12g03060 protein.
   
  0.848
Pc13g05560
Pc13g05560 protein.
    
  0.842
Pc21g04340
Pc21g04340 protein.
    
 0.834
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.