STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc21g03430Pc21g03430 protein. (224 aa)    
Predicted Functional Partners:
Pc14g00620
Pc14g00620 protein.
   
 0.999
Pc21g03150
Pc21g03150 protein.
   
0.995
Pc12g16060
Pc12g16060 protein; Belongs to the AAA ATPase family.
    
 0.994
Pc13g02590
Pc13g02590 protein.
    
 0.993
Pc16g02340
Pc16g02340 protein.
   
 0.977
Pc22g06760
Pc22g06760 protein.
   
 0.970
Pc16g12450
Pc16g12450 protein.
    
 0.934
Pc12g10850
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.925
Pc13g05910
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.891
Pc13g03360
Pc13g03360 protein.
    
 0.889
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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