STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc21g08890Pc21g08890 protein. (663 aa)    
Predicted Functional Partners:
Pc13g08290
Pc13g08290 protein.
   
0.982
Pc12g00340
Pc12g00340 protein.
    
 0.541
Pc20g07500
Pc20g07500 protein.
   
0.480
Pc13g14520
Pc13g14520 protein.
    
 0.452
Pc13g10080
Pc13g10080 protein.
    
 0.452
Pc14g01930
Pc14g01930 protein.
    
 0.452
Pc20g07530
Pc20g07530 protein.
    
 0.452
Pc20g03060
Pc20g03060 protein.
    
 0.452
Pc21g03030
Pc21g03030 protein.
    
 0.452
Pc22g09010
Pc22g09010 protein.
    
 0.452
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.