STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc21g09310Pc21g09310 protein. (951 aa)    
Predicted Functional Partners:
Pc21g16310
Pc21g16310 protein.
    
 0.942
Pc18g03850
Pc18g03850 protein.
    
 0.887
Pc18g05110
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.887
Pc22g00640
Pc22g00640 protein.
    
 0.824
Pc22g03550
Pc22g03550 protein.
    
 0.824
Pc13g06620
Pc13g06620 protein.
    
 0.716
Pc21g14570
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.716
Pc21g23620
Pc21g23620 protein.
    
 0.669
Pc13g14200
Pc13g14200 protein.
    
 0.611
Pc21g06790
Pc21g06790 protein.
    
 
 0.608
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.