STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g01690Pc22g01690 protein. (916 aa)    
Predicted Functional Partners:
Pc12g07460
Pc12g07460 protein.
   
 0.999
Pc13g03200
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
Pc20g00110
Pc20g00110 protein; Belongs to the WD repeat SEC13 family.
   
 0.999
Pc12g15830
Pc12g15830 protein.
   
0.998
Pc20g13020
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.998
Pc20g12620
Pc20g12620 protein; Belongs to the synaptobrevin family.
    
 0.986
Pc12g15110
Pc12g15110 protein.
   
 0.967
Pc16g09790
Pc16g09790 protein.
   
 0.935
Pc16g09800
Pc16g09800 protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.935
Pc15g01840
Pc15g01840 protein.
    
 0.843
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.