STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g06970Pc22g06970 protein. (4045 aa)    
Predicted Functional Partners:
Pc12g08650
Pc12g08650 protein.
   
 
0.808
Pc13g09510
Pc13g09510 protein.
   
 0.702
Pc22g16800
Pc22g16800 protein.
   
 0.702
Pc22g13280
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.684
Pc16g08400
Pc16g08400 protein.
    
 0.642
Pc16g08410
Pc16g08410 protein.
    
 0.642
Pc16g08420
Pc16g08420 protein.
    
 0.642
Pc12g06650
Pc12g06650 protein.
   
   0.636
Pc13g11700
Pc13g11700 protein; Belongs to the cullin family.
     
 0.635
Pc13g11890
Pc13g11890 protein.
   
 0.615
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.