STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g07170Pc22g07170 protein. (863 aa)    
Predicted Functional Partners:
Pc13g15190
Pc13g15190 protein.
   
 0.958
Pc22g09820
Pc22g09820 protein.
   
 0.953
Pc13g04030
Pc13g04030 protein.
   
 0.931
Pc21g15370
Pc21g15370 protein.
   
 0.929
Pc21g20450
Pc21g20450 protein.
   
 0.928
Pc21g15230
Pc21g15230 protein.
   
 0.926
Pc06g01880
Pc06g01880 protein.
   
 0.924
Pc16g13340
Pc16g13340 protein.
    
 0.923
Pc20g07390
Pc20g07390 protein.
    
 0.922
Pc13g12620
Pc13g12620 protein.
   
 0.919
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.