STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g24620Pc22g24620 protein. (387 aa)    
Predicted Functional Partners:
Pc12g09060
4-hydroxyphenylpyruvate dioxygenase.
    
 0.920
Pc16g12660
Pc16g12660 protein.
  
 
 0.920
Pc22g07130
4-hydroxyphenylpyruvate dioxygenase.
    
 0.920
Pc21g12820
Pc21g12820 protein.
  
  
 
0.909
Pc12g09040
Pc12g09040 protein.
     
 0.907
Pc12g13180
Pc12g13180 protein.
  
  
 
0.907
Pc13g08330
Pc13g08330 protein.
  
  
 
0.907
Pc21g22500
Pc21g22500 protein.
     
 0.907
Pc12g11860
Pc12g11860 protein.
  
 
 0.906
pahA
Phenylacetate hydroxylase pahA-Penicillium chrysogenum.
    
  0.900
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.