STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g03550Pc22g03550 protein. (1454 aa)    
Predicted Functional Partners:
Pc21g16310
Pc21g16310 protein.
   
 0.974
Pc18g03850
Pc18g03850 protein.
   
 0.920
Pc18g05110
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.920
Pc12g09130
Pc12g09130 protein.
    
 0.910
Pc22g02950
Pc22g02950 protein.
   
 0.828
Pc21g09310
Pc21g09310 protein.
    
 0.824
Pc21g23620
Pc21g23620 protein.
    
 0.717
Pc21g14570
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.649
Pc20g13580
Pc20g13580 protein.
    
 0.532
Pc13g06620
Pc13g06620 protein.
    
 0.531
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.