STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g21750Pc22g21750 protein. (423 aa)    
Predicted Functional Partners:
Pc21g20880
Pc21g20880 protein.
    
 0.961
Pc21g08680
Pc21g08680 protein; Belongs to the cullin family.
    
 0.759
Pc22g04060
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
     
 0.757
Pc20g02820
Pc20g02820 protein.
     
 0.710
Pc22g25430
Pc22g25430 protein.
     
 0.693
Pc21g18150
Pc21g18150 protein.
    
  0.688
Pc20g03050
Pc20g03050 protein.
    
  0.685
Pc13g05560
Pc13g05560 protein.
    
  0.679
Pc20g00850
Pc20g00850 protein.
     
 0.660
Pc12g03060
Pc12g03060 protein.
    
  0.647
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.