STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g25830Pc22g25830 protein. (365 aa)    
Predicted Functional Partners:
Pc23g00530
Pc23g00530 protein.
  
 
  0.535
Pc12g06560
Pc12g06560 protein.
  
 
  0.534
Pc20g13640
Pc20g13640 protein.
  
     0.527
Pc14g01530
Pc14g01530 protein.
  
     0.526
Pc14g01590
Pc14g01590 protein.
  
 
  0.526
Pc18g03920
Pc18g03920 protein.
  
     0.524
Pc23g00580
Pc23g00580 protein.
  
 
  0.521
Pc22g06280
Pc22g06280 protein.
  
     0.520
Pc21g10810
Pc21g10810 protein.
  
 
 0.519
Pc16g15440
Pc16g15440 protein.
  
     0.516
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.