STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g09020Pc22g09020 protein; Belongs to the arginase family. (409 aa)    
Predicted Functional Partners:
Pc13g12400
Pc13g12400 protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.971
Pc13g07510
Pc13g07510 protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.950
Pc21g18390
Pc21g18390 protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.950
Pc21g18380
Pc21g18380 protein.
    
 0.912
Pc22g20940
Pc22g20940 protein.
    
 0.912
Pc13g13670
Amine oxidase.
    
 0.906
Pc16g13170
Pc16g13170 protein; Belongs to the arginase family.
  
  
 
0.904
Pc21g06570
Pc21g06570 protein; Belongs to the arginase family.
  
  
 
0.904
Pc16g03670
Pc16g03670 protein; Belongs to the PAL/histidase family.
  
 
 0.763
Pc21g10800
Pc21g10800 protein.
  
  
 0.618
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.