STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g09040Pc22g09040 protein. (387 aa)    
Predicted Functional Partners:
Pc13g09210
Pc13g09210 protein.
    
 0.997
Pc16g14080
Pc16g14080 protein.
    
 0.997
Pc20g07870
Pc20g07870 protein.
   
 0.997
Pc21g06340
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.997
Pc21g15390
Pc21g15390 protein; Belongs to the PI3/PI4-kinase family.
    
 0.997
Pc22g01570
Pc22g01570 protein.
    
 0.997
Pc21g01240
Pc21g01240 protein.
   
 0.996
Pc22g08060
Pc22g08060 protein.
    
 0.995
Pc22g25300
Pc22g25300 protein.
    
 0.994
Pc16g12560
Pc16g12560 protein.
    
 0.992
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.