STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pc22g06060Pc22g06060 protein. (798 aa)    
Predicted Functional Partners:
Pc20g03810
Pc20g03810 protein.
   
   0.946
Pc16g02270
Pc16g02270 protein.
   
 
 0.826
Pc16g06270
Pc16g06270 protein.
   
 0.802
Pc16g10480
Prohibitin.
   
 0.787
Pc13g12380
Prohibitin.
   
 0.785
Pc22g22080
Pc22g22080 protein.
  
  
 0.774
Pc22g11740
Pc22g11740 protein.
  
 
 0.696
Pc22g11340
Pc22g11340 protein.
    
 
 0.655
PIM1
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.
  
 
 0.641
Pc20g06920
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.631
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.