Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pc12g08450 | Pc14g01230 | B6GY92 | B6H5V1 | Proteasome subunit alpha type. | Pc14g01230 protein. | 0.999 |
Pc12g08450 | Pc20g11580 | B6GY92 | B6HG92 | Proteasome subunit alpha type. | Proteasome subunit alpha type. | 0.999 |
Pc12g08450 | Pc22g07900 | B6GY92 | B6HRT5 | Proteasome subunit alpha type. | Pc22g07900 protein. | 0.999 |
Pc12g08450 | vps10 | B6GY92 | B6H711 | Proteasome subunit alpha type. | Vacuolar protein sorting/targeting protein 10; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. Executes multiple rounds of sorting by cycling between the late Golgi and a prevacuolar endosome-like compartment (By similarity); Belongs to the VPS10-related sortilin family. | 0.761 |
Pc13g01790 | Pc13g07220 | B6H1U0 | B6H3S1 | AP-1 complex subunit gamma. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.975 |
Pc13g01790 | Pc13g10100 | B6H1U0 | B6H4R0 | AP-1 complex subunit gamma. | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | 0.603 |
Pc13g01790 | Pc18g01990 | B6H1U0 | B6HCP4 | AP-1 complex subunit gamma. | Pc18g01990 protein. | 0.646 |
Pc13g01790 | Pc20g05630 | B6H1U0 | B6HF74 | AP-1 complex subunit gamma. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.999 |
Pc13g01790 | vps10 | B6H1U0 | B6H711 | AP-1 complex subunit gamma. | Vacuolar protein sorting/targeting protein 10; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. Executes multiple rounds of sorting by cycling between the late Golgi and a prevacuolar endosome-like compartment (By similarity); Belongs to the VPS10-related sortilin family. | 0.712 |
Pc13g07220 | Pc13g01790 | B6H3S1 | B6H1U0 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | AP-1 complex subunit gamma. | 0.975 |
Pc13g07220 | Pc13g10100 | B6H3S1 | B6H4R0 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | 0.499 |
Pc13g07220 | Pc18g01990 | B6H3S1 | B6HCP4 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Pc18g01990 protein. | 0.621 |
Pc13g07220 | Pc20g05630 | B6H3S1 | B6HF74 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.876 |
Pc13g07220 | vps10 | B6H3S1 | B6H711 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Vacuolar protein sorting/targeting protein 10; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. Executes multiple rounds of sorting by cycling between the late Golgi and a prevacuolar endosome-like compartment (By similarity); Belongs to the VPS10-related sortilin family. | 0.833 |
Pc13g10100 | Pc13g01790 | B6H4R0 | B6H1U0 | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | AP-1 complex subunit gamma. | 0.603 |
Pc13g10100 | Pc13g07220 | B6H4R0 | B6H3S1 | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.499 |
Pc13g10100 | Pc22g05200 | B6H4R0 | B6HUD3 | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | Pc22g05200 protein. | 0.999 |
Pc13g10100 | vps10 | B6H4R0 | B6H711 | Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. | Vacuolar protein sorting/targeting protein 10; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. Executes multiple rounds of sorting by cycling between the late Golgi and a prevacuolar endosome-like compartment (By similarity); Belongs to the VPS10-related sortilin family. | 0.759 |
Pc14g01230 | Pc12g08450 | B6H5V1 | B6GY92 | Pc14g01230 protein. | Proteasome subunit alpha type. | 0.999 |
Pc14g01230 | Pc20g11580 | B6H5V1 | B6HG92 | Pc14g01230 protein. | Proteasome subunit alpha type. | 0.999 |
page 1 of 3