STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE05812.1Hemolysin activation/secretion protein. (526 aa)    
Predicted Functional Partners:
SFE05689.1
Hypothetical protein.
 
  
 0.956
SFE05784.1
Biopolymer transport protein ExbB.
 
    0.949
SFE05711.1
Putative porin.
 
    0.948
SFE05738.1
TonB family C-terminal domain-containing protein.
 
    0.946
SFE05762.1
Biopolymer transport protein ExbD.
 
    0.937
SFE05635.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
 
 0.913
SFE05892.1
Hypothetical protein.
 
    0.729
SFE81819.1
Hemolysin activation/secretion protein.
  
     0.665
SFF05384.1
Outer membrane autotransporter barrel domain-containing protein.
 
 0.665
SFE05866.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.648
Your Current Organism:
Dyella marensis
NCBI taxonomy Id: 500610
Other names: D. marensis, Dyella marensis Lee and Lee 2009, JCM 14959, KCTC 22144, strain CS5-B2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.