STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE95433.1Predicted methyltransferase. (298 aa)    
Predicted Functional Partners:
SFE95403.1
23S rRNA pseudouridine2457 synthase; Belongs to the pseudouridine synthase RsuA family.
       0.803
SFE29531.1
Alginate export.
  
     0.722
SFE62074.1
TonB-dependent Receptor Plug Domain.
  
     0.702
SFF42182.1
Iron complex outermembrane recepter protein.
  
     0.700
SFE27972.1
TonB-dependent receptor.
  
     0.691
SFE81285.1
Iron complex outermembrane recepter protein.
  
     0.660
SFD99374.1
TonB-dependent Receptor Plug Domain.
  
     0.659
SFF45146.1
Iron complex outermembrane recepter protein.
  
     0.644
SFE31539.1
TonB-dependent receptor.
  
     0.641
SFF16990.1
Tetratricopeptide repeat-containing protein.
  
     0.638
Your Current Organism:
Dyella marensis
NCBI taxonomy Id: 500610
Other names: D. marensis, Dyella marensis Lee and Lee 2009, JCM 14959, KCTC 22144, strain CS5-B2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.