STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF25270.1Hypothetical protein. (302 aa)    
Predicted Functional Partners:
SFF25294.1
Hypothetical protein.
       0.773
SFD99678.1
Alpha galactosidase A.
    
 0.770
SFF58094.1
Exo-beta-1,3-glucanase, GH17 family.
    
 0.735
SFF25364.1
Phage tail tape measure protein, lambda family.
 
    0.701
SFE57447.1
Alginate lyase.
    
  0.700
SFE10465.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.699
SFF25429.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
 
    0.684
SFE31748.1
Beta-glucanase, GH16 family.
    
  0.670
SFF25406.1
Lambda-like phage minor tail protein L.
 
    0.666
SFE62492.1
YXWGXW repeat-containing protein.
    
 0.649
Your Current Organism:
Dyella marensis
NCBI taxonomy Id: 500610
Other names: D. marensis, Dyella marensis Lee and Lee 2009, JCM 14959, KCTC 22144, strain CS5-B2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.