STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF38205.1Hypothetical protein. (334 aa)    
Predicted Functional Partners:
SFE00000.1
Amino acid adenylation domain-containing protein.
  
 
  0.962
SFF33475.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.793
SFE05970.1
Cytochrome c peroxidase.
  
 
 0.762
SFE78149.1
3',5'-cyclic AMP phosphodiesterase CpdA.
 
 
 0.762
SFF09309.1
Cytochrome c peroxidase.
  
 
 0.762
SFF59130.1
Very-short-patch-repair endonuclease.
    
  0.762
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.748
SFE78184.1
Plastocyanin.
 
 
 0.739
SFE26008.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.721
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.715
Your Current Organism:
Dyella marensis
NCBI taxonomy Id: 500610
Other names: D. marensis, Dyella marensis Lee and Lee 2009, JCM 14959, KCTC 22144, strain CS5-B2
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