STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF38473.1Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. (367 aa)    
Predicted Functional Partners:
SFE79816.1
Phytoene synthase.
 
 0.865
SFE70082.1
Cytochrome P450.
  
 0.672
SFE41589.1
PAP2 superfamily protein.
  
 
  0.592
SFE78149.1
3',5'-cyclic AMP phosphodiesterase CpdA.
 
     0.496
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
  0.492
SFE27713.1
2-polyprenyl-6-methoxyphenol hydroxylase.
   
  0.492
SFE29450.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
   
  0.492
SFE66257.1
2-polyprenyl-6-methoxyphenol hydroxylase.
   
  0.492
SFF30591.1
2-octaprenyl-6-methoxyphenol hydroxylase.
   
  0.492
SFF30611.1
2-octaprenylphenol hydroxylase.
   
  0.492
Your Current Organism:
Dyella marensis
NCBI taxonomy Id: 500610
Other names: D. marensis, Dyella marensis Lee and Lee 2009, JCM 14959, KCTC 22144, strain CS5-B2
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