STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF42863.1Serine protease DegQ. (395 aa)    
Predicted Functional Partners:
SFF10313.1
sigma-E factor negative regulatory protein RseA.
  
 
 0.879
SFF48366.1
Outer membrane protein beta-barrel domain-containing protein.
    
 
 0.862
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.723
SFE70272.1
PAS domain S-box-containing protein.
  
  
 0.652
SFF17123.1
Na+/proline symporter.
  
  
 0.629
SFF15223.1
Signal transduction histidine kinase.
  
  
 0.628
SFF42896.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
  0.573
SFE36237.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
  
  0.562
SFF25429.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
  
  0.562
SFF42879.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
   0.558
Your Current Organism:
Dyella marensis
NCBI taxonomy Id: 500610
Other names: D. marensis, Dyella marensis Lee and Lee 2009, JCM 14959, KCTC 22144, strain CS5-B2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.