node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
infA | rpmB | SAMN02799615_00930 | SAMN02799615_02048 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.852 |
infA | rpsB | SAMN02799615_00930 | SAMN02799615_03659 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.998 |
infA | rpsD | SAMN02799615_00930 | SAMN02799615_03700 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
infA | rpsF | SAMN02799615_00930 | SAMN02799615_01667 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.971 |
infA | rpsI | SAMN02799615_00930 | SAMN02799615_02794 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.962 |
infA | rpsK | SAMN02799615_00930 | SAMN02799615_03701 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
infA | rpsM | SAMN02799615_00930 | SAMN02799615_03702 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
infA | rpsN | SAMN02799615_00930 | SAMN02799615_03710 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.999 |
infA | rpsO | SAMN02799615_00930 | SAMN02799615_00410 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
infA | rpsP | SAMN02799615_00930 | SAMN02799615_01676 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.958 |
rpmB | infA | SAMN02799615_02048 | SAMN02799615_00930 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.852 |
rpmB | rpsB | SAMN02799615_02048 | SAMN02799615_03659 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.997 |
rpmB | rpsD | SAMN02799615_02048 | SAMN02799615_03700 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
rpmB | rpsF | SAMN02799615_02048 | SAMN02799615_01667 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.998 |
rpmB | rpsI | SAMN02799615_02048 | SAMN02799615_02794 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
rpmB | rpsK | SAMN02799615_02048 | SAMN02799615_03701 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |
rpmB | rpsM | SAMN02799615_02048 | SAMN02799615_03702 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.997 |
rpmB | rpsN | SAMN02799615_02048 | SAMN02799615_03710 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.999 |
rpmB | rpsO | SAMN02799615_02048 | SAMN02799615_00410 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |
rpmB | rpsP | SAMN02799615_02048 | SAMN02799615_01676 | Large subunit ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |