STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA86250.1Hypothetical protein; KEGG: cal:orf19.6294 0.0042 MYO1; class II myosin heavy chain K01553; Psort location: Cytoplasmic, score: 8.87. (221 aa)    
Predicted Functional Partners:
EEA86249.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.801
EEA86248.1
Hypothetical protein; KEGG: cno:NT01CX_1803 2.1e-24 type IIS restriction enzyme R and M protein, putative K00571.
       0.774
DpnA_2
KEGG: smu:SMU.505 8.1e-98 putative adenine-specific DNA methylase K07319; Belongs to the N(4)/N(6)-methyltransferase family.
       0.738
dam
DNA adenine methylase; KEGG: lsa:LSA0143 3.4e-60 putative adenine-specific DNA methyltransferase K06223.
       0.723
DpnB
DpmII restriction endonuclease; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family.
       0.723
DpnA_1
Methyltransferase domain protein; KEGG: sai:Saci_1975 1.5e-08 modification methylase K00590; Psort location: Cytoplasmic, score: 8.87; Belongs to the N(4)/N(6)-methyltransferase family.
       0.492
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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