STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA86196.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (186 aa)    
Predicted Functional Partners:
YmdB
Macro domain protein; KEGG: bur:Bcep18194_A6181 1.1e-40 Appr-1-p processing enzyme family K00985; Psort location: Cytoplasmic, score: 8.87.
 
      0.900
EEA86197.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.885
EEA84485.1
Macro domain protein; KEGG: reh:H16_A1552 1.1e-22 predicted phosphatase homolog to the C-terminal domain of histone macroH2A1; Psort location: Cytoplasmic, score: 8.87.
 
      0.881
EEA86195.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.732
DraG
ADP-ribosylglycohydrolase; KEGG: sat:SYN_02522 3.1e-41 ADP-ribosylglycohydrolase K01250; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.560
EEA86194.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.502
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.