STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GrdB_4KEGG: chy:CHY_2393 2.3e-29 grdB; glycine reductase, selenoprotein B; Psort location: Cytoplasmic, score: 8.87. (77 aa)    
Predicted Functional Partners:
grdB
KEGG: chy:CHY_2393 2.7e-122 grdB; glycine reductase, selenoprotein B; Psort location: Cytoplasmic, score: 8.87.
     0.992
GrdB_2
Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; KEGG: tde:TDE2119 7.8e-109 grdB-2; glycine reductase complex selenoprotein GrdB2; Psort location: Cytoplasmic, score: 8.87.
     0.977
GrdA1_1
KEGG: tde:TDE0745 6.4e-34 grdA; glycine reductase complex selenoprotein GrdA.
 
     0.920
GrdA1_2
KEGG: chy:CHY_2392 5.0e-11 grdA; glycine reductase, selenoprotein A.
 
     0.909
GrdC
KEGG: tte:TTE1875 6.0e-157 fabH4; 3-oxoacyl-(acyl-carrier-protein) synthase III; Psort location: Cytoplasmic, score: 8.87.
 
     0.871
grdE
Glycine reductase, subunit ABC; KEGG: tte:TTE1879 5.2e-167 GrdE proprotein; Psort location: Cytoplasmic, score: 8.87.
 
     0.868
plsX
KEGG: tte:TTE1874 8.1e-114 plsX2; fatty acid/phospholipid biosynthesis enzyme; Psort location: Cytoplasmic, score: 8.87.
 
     0.868
EEA86182.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.812
GrdE_1
Glycine/sarcosine/betaine reductase component B subunit alpha and beta; KEGG: tte:TTE1879 1.4e-139 GrdE proprotein; Psort location: Cytoplasmic, score: 8.87.
 
     0.783
EEA85838.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.703
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.