STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gapGlyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ctc:CTC00378 1.4e-123 glyceraldehyde 3-phosphate dehydrogenase K00134; Psort location: Cytoplasmic, score: 9.98; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)    
Predicted Functional Partners:
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 0.999
pgk
Phosphoglycerate kinase; KEGG: cno:NT01CX_1411 4.5e-168 phosphoglycerate kinase K00927; Psort location: Cytoplasmic, score: 9.98.
 0.996
fba
KEGG: cno:NT01CX_1380 1.2e-117 fructose-1,6-bisphosphate aldolase, class II K01622; Psort location: Cytoplasmic, score: 8.87.
  
 0.957
FbaA
KEGG: lwe:lwe2152 1.7e-79 fructose-bisphosphate aldolase, class II family K01622; Psort location: Cytoplasmic, score: 8.87.
  
 0.957
pgi
KEGG: bca:BCE_5037 4.0e-128 pgi; phosphoglucose isomerase K01810; Psort location: Cytoplasmic, score: 9.98; Belongs to the GPI family.
  
 
 0.919
gap-2
KEGG: cno:NT01CX_1404 2.4e-146 glyceraldehyde-3-phosphate dehydrogenase, type I K00155; Psort location: Cytoplasmic, score: 9.98.
  
  
 
0.905
Udk_2
Phosphoribulokinase/uridine kinase family protein; KEGG: tte:TTE1778 3.4e-122 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.873
pyk
Pyruvate kinase; KEGG: tte:TTE1815 8.3e-192 pykF; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.867
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
 0.826
deoC-2
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
 0.826
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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