STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA85997.1Hypothetical protein; KEGG: mpu:MYPU_3890 0.0085 lig; DNA ligase (polydeoxyribonucleotide synthase [NAD+]) K01972; Psort location: Cytoplasmic, score: 8.87. (191 aa)    
Predicted Functional Partners:
EEA85995.1
Hypothetical protein; KEGG: fnu:FN0522 2.2e-11 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 8.87.
       0.774
EEA85996.1
Hypothetical protein.
       0.774
EEA85998.1
Hypothetical protein.
       0.741
EEA85999.1
Putative toxin-antitoxin system, toxin component.
       0.519
Hin
Resolvase, N-terminal domain protein; KEGG: mpe:MYPE3650 0.0021 rnc; ribonuclease III K03685; Psort location: Cytoplasmic, score: 8.87.
       0.500
EEA85994.1
Hypothetical protein.
       0.500
PolC_3
KEGG: bce:BC3611 1.4e-31 DNA polymerase III alpha subunit K03763; Psort location: Cytoplasmic, score: 8.87.
       0.481
LexA_2
Peptidase S24-like protein; KEGG: ppd:Ppro_1901 1.4e-15 SOS-response transcriptional repressor, LexA K01356; Psort location: Cytoplasmic, score: 8.87.
       0.439
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.