STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BceA_1KEGG: lwe:lwe2133 1.7e-65 ABC transporter, ATP-binding protein K06020; Psort location: CytoplasmicMembrane, score: 9.49. (256 aa)    
Predicted Functional Partners:
BceB_2
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.964
EEA85680.1
KEGG: pen:PSEEN3042 0.0047 macB; macrolide ABC efflux protein MacB; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.947
CbiO
Cobalt ABC transporter, ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
    
0.913
GraS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpe:CPE0841 2.3e-54 two-component sensor histidine kinase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.675
BceB_1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.654
EEA85857.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
       0.628
YxlF_2
Lantibiotic protection ABC transporter, ATP-binding subunit; KEGG: fal:FRAAL1877 3.1e-41 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
0.587
ArtQ_1
KEGG: hpa:HPAG1_0922 9.3e-26 amino acid ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
    0.518
Smc_3
Efflux ABC transporter, permease protein; KEGG: ddi:DDB0167703 1.1e-14 hypothetical protein K01971; Psort location: Cellwall, score: 8.93.
 
   0.514
EEA85019.1
Efflux transporter, RND family, MFP subunit; KEGG: cal:orf19.2410 0.0076 IMH1; involved in vesicular transport K01553.
  
 
 0.514
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.