STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA85691.1ABC transporter, solute-binding protein. (415 aa)    
Predicted Functional Partners:
YcjO
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 1.6e-13 molybdenum ABC transporter ModB K06022; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.988
SugB
ABC transporter, permease protein; KEGG: syn:sll0739 3.7e-10 modBC; ABC-type molybdate transport system permease/ATP-binding protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
  0.987
YdjZ
SNARE-like domain protein; KEGG: noc:Noc_0589 2.3e-16 pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3) component and related enzyme K00520; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.762
YnjE_1
Rhodanese-like protein; KEGG: ppr:PBPRA1240 3.7e-77 putative thiosulfate sulfur transferase K01010; Psort location: Cytoplasmic, score: 8.87.
 
    0.693
RihB
KEGG: cgl:NCgl1309 1.8e-13 cgl1364; inosine-uridine nucleoside N-ribohydrolase K01239; Psort location: Cytoplasmic, score: 8.87.
 
     0.682
YnjE_3
Rhodanese-like protein; KEGG: msu:MS1140 2.7e-67 sseA; rhodanese-related sulfurtransferases K01010.
 
    0.677
YnjE_2
Rhodanese-like protein; KEGG: msu:MS1140 5.2e-64 sseA; rhodanese-related sulfurtransferases K01010.
 
    0.654
PotA_4
ABC transporter, ATP-binding protein; KEGG: mfl:Mfl511 2.7e-58 spermidine/putrescine ABC transporter ATP-binding component K02052; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.536
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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