STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RihBKEGG: cgl:NCgl1309 1.8e-13 cgl1364; inosine-uridine nucleoside N-ribohydrolase K01239; Psort location: Cytoplasmic, score: 8.87. (301 aa)    
Predicted Functional Partners:
PunA
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 0.920
add
Adenosine deaminase; KEGG: cpe:CPE2506 1.5e-96 add; probable adenosine deaminase K01488; Psort location: Cytoplasmic, score: 8.87; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.
  
 
 0.911
YfkN_1
Ser/Thr phosphatase family protein; KEGG: tte:TTE0343 1.4e-33 ushA; 5-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases' K01119; Belongs to the 5'-nucleotidase family.
  
 
  0.905
hpt
KEGG: cpf:CPF_2216 3.3e-53 hpt; hypoxanthine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.98; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.905
hpt-2
KEGG: chy:CHY_1067 6.9e-53 hpt; hypoxanthine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.98; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.905
YfkN_2
5'-nucleotidase, C-terminal domain protein; KEGG: bsu:BG12930 1.1e-21 yfkN; similar to 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01081:K01119; Psort location: Cellwall, score: 10.00; Belongs to the 5'-nucleotidase family.
  
 
  0.905
YfkN_3
5'-nucleotidase, C-terminal domain protein; KEGG: bcl:ABC1445 3.0e-43 5'-nucleotidase K01081; Psort location: Extracellular, score: 7.62; Belongs to the 5'-nucleotidase family.
  
 
  0.905
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
    
 0.904
cobB-2
Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
 
 0.904
apt
Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
    
 0.904
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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