STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA85613.1Hypothetical protein; KEGG: efa:EF1863 0.00040 sensor histidine kinase; Psort location: Cytoplasmic, score: 8.87. (182 aa)    
Predicted Functional Partners:
EEA85612.1
Hypothetical protein; KEGG: cpe:CPE2459 0.0075 murD; UDP-N-acetylmuramoylalanine D-glutamate ligase K01925; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEA85611.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.553
EEA85610.1
Hypothetical protein; KEGG: pmm:PMM1647 0.0031 DNA polymerase III delta subunit K02340; Psort location: Cytoplasmic, score: 8.87.
       0.514
EEA85614.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.456
PilE
Prepilin-type cleavage/methylation N-terminal domain protein.
       0.453
HxcR
KEGG: pen:PSEEN2333 4.9e-75 xcpR-2; type II secretion pathway protein E K01509; Psort location: Cytoplasmic, score: 9.98.
       0.406
EpsF
Bacterial type II secretion system domain protein F; Psort location: CytoplasmicMembrane, score: 9.99.
       0.406
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.