STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA85540.1Hypothetical protein; KEGG: aha:AHA_2889 0.0047 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K01005; Psort location: CytoplasmicMembrane, score: 9.99. (307 aa)    
Predicted Functional Partners:
prdA
D-proline reductase, PrdA proprotein; Psort location: Cytoplasmic, score: 8.87.
 
     0.723
PrdA_4
Hypothetical protein; KEGG: sth:STH2870 8.9e-06 grdE; glycine reductase proprotein.
 
     0.722
PrdA_3
Hypothetical protein; KEGG: sth:STH2870 0.0062 grdE; glycine reductase proprotein; Psort location: Cytoplasmic, score: 8.87.
 
     0.719
prdA-2
D-proline reductase, PrdA proprotein; KEGG: sth:STH2870 1.6e-13 grdE; glycine reductase proprotein; Psort location: Cytoplasmic, score: 8.87.
 
     0.700
EEA85594.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.695
PrdB_2
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.591
prdB
D-proline reductase, PrdB subunit; KEGG: chy:CHY_2393 1.9e-08 grdB; glycine reductase, selenoprotein B; Psort location: Cytoplasmic, score: 8.87.
 
     0.571
ArcB
KEGG: lsl:LSL_1273 1.9e-75 ornithine cyclodeaminase K01750; Psort location: Cytoplasmic, score: 8.87.
 
     0.440
RnfC_2
Respiratory-chain NADH dehydrogenase 51 Kd subunit; KEGG: eci:UTI89_C1819 7.8e-27 rnfC; electron transport complex protein RnfC K03615; Psort location: Cytoplasmic, score: 8.87.
 
     0.433
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.