STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PatA_1MBOAT family protein; KEGG: pen:PSEEN4543 2.6e-94 algI; alginate O-acetylation protein AlgI K00680; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the membrane-bound acyltransferase family. (472 aa)    
Predicted Functional Partners:
EEA85403.1
Hypothetical protein; KEGG: mfl:Mfl515 0.00076 sucrose-6-phosphate hydrolase K01193.
 
     0.933
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.748
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.748
EEA85001.1
Hypothetical protein; KEGG: bce:BC2676 0.0011 glycerophosphoryl diester phosphodiesterase K01126.
 
     0.747
SrfAB
AMP-binding enzyme; KEGG: ava:Ava_1613 3.3e-83 non-ribosomal peptide synthase K00644; Psort location: Cytoplasmic, score: 9.65; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.737
EEA85402.1
Positive regulator of sigma(E), RseC/MucC; Psort location: CytoplasmicMembrane, score: 9.75.
       0.425
CsoR
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.422
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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