STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA85303.1HIRAN domain protein; KEGG: fnu:FN0522 0.0057 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 8.87. (621 aa)    
Predicted Functional Partners:
FtsN
Sporulation and cell division repeat protein; KEGG: mpe:MYPE6470 1.9e-17 parC; DNA topoisomerase IV subunit A K02621; Psort location: Cytoplasmic, score: 8.87.
  
     0.742
LytC_23
ErfK/YbiS/YcfS/YnhG; KEGG: bsu:BG10407 3.6e-37 lytC, cwlB; N-acetylmuramoyl-L-alanine amidase, major autolysin, peptidoglycan hydrolase, LytC amidase family K01448; Psort location: Cellwall, score: 9.17.
 
     0.734
Smc_1
Hypothetical protein; KEGG: ddi:DDB0167703 1.3e-14 hypothetical protein K01971; Psort location: Cellwall, score: 9.17.
  
    0.731
EEA85817.1
Fibronectin type III domain protein; KEGG: pfa:MAL13P1.278 1.5e-11 Ser/Thr protein kinase K00870.
 
     0.667
EEA84601.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.604
LytC_2
Papain family cysteine protease; KEGG: ctc:CTC00518 5.8e-48 cwp66 homolog/N-acetylmuramoyl-L-alanine amidase K01446; Psort location: Cellwall, score: 9.17.
  
     0.604
EEA84262.1
Hypothetical protein; KEGG: cal:orf19.2859 0.00076 SRP40; nonribosomal protein of the nucleolus and coiled bodies K01186; Psort location: Cytoplasmic, score: 8.87.
  
     0.564
EEA85094.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.532
XerC_2
Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.87.
  
     0.531
LytC_28
Putative cell wall binding repeat 2; KEGG: bli:BL03348 7.7e-30 lytC; N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49) K01448; Psort location: Cellwall, score: 9.17.
  
     0.499
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.