STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scpAScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (249 aa)    
Predicted Functional Partners:
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.999
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.988
Smc_3
Efflux ABC transporter, permease protein; KEGG: ddi:DDB0167703 1.1e-14 hypothetical protein K01971; Psort location: Cellwall, score: 8.93.
  
 
 0.869
cmk
Cytidylate kinase; KEGG: ctc:CTC01315 3.0e-52 cmk; cytidylate kinase K00945; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.717
Rip2
Peptidase, M50 family; KEGG: reh:H16_A1202 1.4e-22 Zn-dependent membrane-bound protease, M50 family; Psort location: CytoplasmicMembrane, score: 9.99.
       0.702
Hpr
Transcriptional regulator, MarR family; Psort location: Cytoplasmic, score: 8.87.
  
   0.646
ParB
ParB-like protein; KEGG: pub:SAR11_0354 1.1e-43 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
  
  
 0.565
RluB_1
Pseudouridylate synthase; KEGG: tte:TTE1332 6.7e-71 rsuA2; 16S rRNA uridine-516 pseudouridylate synthase and related Pseudouridylate synthase K06178; Psort location: Cytoplasmic, score: 8.87; Belongs to the pseudouridine synthase RsuA family.
 
  
 0.507
Noc
ParB-like protein; KEGG: pub:SAR11_0354 1.4e-36 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 8.87; Belongs to the ParB family.
  
  
 0.490
era
Putative GTP-binding protein era-like protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
  
 0.455
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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