STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA85044.1Efflux ABC transporter, permease protein. (795 aa)    
Predicted Functional Partners:
EEA85046.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 5.8e-49 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.82.
 
   0.952
ResE_4
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: spj:MGAS2096_Spy1107 2.3e-52 two-component system histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
     0.867
RegX3_4
Response regulator receiver domain protein; KEGG: ava:Ava_3369 2.4e-27 two component transcriptional regulator, winged helix family; Psort location: Cytoplasmic, score: 9.98.
 
     0.849
EEA85679.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 1.1e-52 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.49.
 
   0.798
EEA85045.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
    
0.797
BceA_2
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 1.3e-49 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.49.
 
   0.727
YknY_2
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 4.3e-53 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.49.
 
   0.708
EEA85743.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.699
EEA85744.1
Hypothetical protein; KEGG: nse:NSE_0806 0.0040 ubiA; 4-hydroxybenzoate octaprenyltransferase K00810.
  
     0.683
EEA86108.1
KEGG: pen:PSEEN3042 0.0045 macB; macrolide ABC efflux protein MacB; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.681
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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