STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA85003.1Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.26. (882 aa)    
Predicted Functional Partners:
LolD
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 7.2e-58 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.49.
 
   0.875
EEA85679.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 1.1e-52 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.49.
 
   0.820
EEA85046.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 5.8e-49 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.82.
 
   0.810
BceA_2
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 1.3e-49 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.49.
 
   0.803
YknY_2
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 4.3e-53 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.49.
 
   0.790
EEA85002.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
      
0.773
YxdL_2
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0988 1.1e-47 ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.49.
 
   0.699
EEA85889.1
Efflux ABC transporter, permease protein; KEGG: wbr:WGLp385 0.0031 yaeL; predicted membrane-associated Zn-dependent proteases 1; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.674
EEA85979.1
KEGG: tte:TTE0562 1.2e-18 baeS2; sensory transduction histidine kinases K07706; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.594
EEA85001.1
Hypothetical protein; KEGG: bce:BC2676 0.0011 glycerophosphoryl diester phosphodiesterase K01126.
 
     0.580
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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