STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA84524.1LPXTG-motif cell wall anchor domain protein; KEGG: mpe:MYPE6470 6.3e-09 parC; DNA topoisomerase IV subunit A K02621; Psort location: Cellwall, score: 10.00. (2320 aa)    
Predicted Functional Partners:
pyk
Pyruvate kinase; KEGG: tte:TTE1815 8.3e-192 pykF; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 8.87.
   
    0.947
BceB_2
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.538
srtB
Sortase, SrtB family.
 
 
   0.521
EEA84525.1
Hydrophobic domain protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.492
EEA84891.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.453
Smc_3
Efflux ABC transporter, permease protein; KEGG: ddi:DDB0167703 1.1e-14 hypothetical protein K01971; Psort location: Cellwall, score: 8.93.
 
  
 0.452
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.