STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEA84461.1KEGG: ddi:DDB0167703 0.0030 hypothetical protein K01971; Psort location: Cytoplasmic, score: 8.87. (339 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.982
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
    0.714
EEA84882.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
 
 0.611
ErpA
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
 
 0.611
Ndx1_2
Hydrolase, NUDIX family; KEGG: aae:aq_158 1.4e-13 apfA; AP4A hydrolase K03574; Psort location: Cytoplasmic, score: 8.87.
  
    0.593
YigZ
YigZ family protein; KEGG: ctc:CTC02216 3.3e-46 thymidylate synthase K00560; Psort location: Cytoplasmic, score: 8.87.
       0.510
PmpR
DNA-binding regulatory protein, YebC/PmpR family; KEGG: ctc:CTC02215 3.5e-65 hypothetical protein K00975; Psort location: Cytoplasmic, score: 8.87.
       0.462
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.