STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FabG_4Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: bth:BT1015 3.8e-52 putative oxidoreductase; Psort location: Cytoplasmic, score: 9.65. (238 aa)    
Predicted Functional Partners:
sbcD
Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
 
 0.706
fabD
KEGG: tte:TTE1473 4.4e-74 fabD; (acyl-carrier-protein) S-malonyltransferase K00645; Psort location: Cytoplasmic, score: 8.87.
 
 0.629
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.592
nifJ
Pyruvate synthase; KEGG: tte:TTE0445 0. porA; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K03737; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.573
EEA85160.1
Hypothetical protein; KEGG: pmu:PM1846 0.00040 ptsB; phosphotransferase system enzyme II, sucrose-specific, factor IIBC K02809:K02810; Psort location: CytoplasmicMembrane, score: 9.99.
   
 
 0.568
EEA84432.1
Hypothetical protein; KEGG: fnu:FN0592 3.9e-07 pcrA; ATP-dependent DNA helicase pcrA K03657; Psort location: Cytoplasmic, score: 8.87.
   
   0.543
PpiB
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.542
YjcD_1
UvrD/REP helicase; KEGG: sth:STH2968 1.9e-57 putative ATP-dependent DNA helicase K01529; Psort location: Cytoplasmic, score: 8.87.
   
   0.510
EEA84469.1
DnaJ domain protein; KEGG: ctc:CTC00579 0.00012 sbcC; exonuclease sbcC K03546.
   
 0.494
addA
ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.
   
   0.466
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.