STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrbHigh molecular weight rubredoxin; KEGG: sat:SYN_02123 1.4e-38 ferric-chelate reductase / rubredoxin K00521. (379 aa)    
Predicted Functional Partners:
narC
KEGG: cpe:CPE1795 5.3e-94 nitrate reductase NADH oxydase subunit; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.969
FprA1
Metallo-beta-lactamase domain protein; KEGG: eci:UTI89_C3072 1.4e-56 norV; anaerobic nitric oxide reductase flavorubredoxin; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.948
Rbr
Rubrerythrin; KEGG: cpr:CPR_0938 5.4e-53 periplasmic [Fe] hydrogenase 1 K00532; Psort location: Cytoplasmic, score: 8.87.
  
 0.913
EEA85828.1
Hypothetical protein; KEGG: aae:aq_206 0.00020 nirB; nitrite reductase (NAD(P)H) large subunit K00362; Psort location: Extracellular, score: 8.82.
  
 
 0.874
Dfx_1
Putative superoxide reductase; KEGG: ppd:Ppro_1133 7.1e-28 desulfoferrodoxin K00518; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.747
nifJ
Pyruvate synthase; KEGG: tte:TTE0445 0. porA; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K03737; Psort location: Cytoplasmic, score: 8.87.
     
 0.642
ResA_1
Antioxidant, AhpC/TSA family; KEGG: btk:BT9727_3417 4.0e-34 ccdA; cytochrome c-type biogenesis protein (holocytochrome-c synthase) K06196; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.558
EEA84235.1
Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
  
 0.539
EEA85033.1
Flavodoxin; KEGG: btk:BT9727_3300 7.3e-10 flavodoxin K00536.
  
  
 0.506
EEA84303.1
Hypothetical protein; KEGG: reh:H16_A0527 5.3e-78 phoH; phosphate starvation-inducible protein PhoH,predicted ATPase; Psort location: Cytoplasmic, score: 9.98.
   
   0.491
Your Current Organism:
Clostridium hiranonis
NCBI taxonomy Id: 500633
Other names: Clostridium hiranonis DSM 13275, Clostridium hiranonis str. DSM 13275, Clostridium hiranonis strain DSM 13275, [. hiranonis DSM 13275, [Clostridium] hiranonis DSM 13275
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