Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEX70142.1Transposase, IS4 family. (433 aa)    
Predicted Functional Partners:
FbpA
Fibronectin-binding protein A domain protein.
  
    0.646
EEX68169.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.639
EEX70141.1
Hypothetical protein.
       0.569
EEX68915.1
Myo-inositol catabolism protein IolB; Psort location: Cytoplasmic, score: 8.96.
   
    0.538
EEX69013.1
N-6 DNA Methylase.
  
    0.443
Your Current Organism:
Mitsuokella multacida
NCBI taxonomy Id: 500635
Other names: M. multacida DSM 20544, Mitsuokella multacida DSM 20544, Mitsuokella multacida NCTC 10934, Mitsuokella multacida str. DSM 20544, Mitsuokella multacida strain DSM 20544
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