Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EEX69425.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (425 aa)    
Predicted Functional Partners:
EEX67861.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.883
EEX69235.1
TIGR00268 family protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.862
nifJ
Pyruvate synthase.
    
 0.847
etfA
Electron transfer flavoprotein FAD-binding domain protein; Psort location: Cytoplasmic, score: 8.96.
    
 0.758
larC
TIGR00299 family protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
  
 0.734
EEX68171.1
Cobalamin biosynthesis protein CbiM; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.590
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
 0.585
EEX70119.1
Electron transfer flavoprotein domain protein.
    
 0.549
EEX69424.1
Transporter, anaerobic C4-dicarboxylate uptake (Dcu) family; Psort location: CytoplasmicMembrane, score: 10.00.
       0.549
EEX68352.1
Phosphocarrier, HPr family; Psort location: Cytoplasmic, score: 9.97.
    
 0.504
Your Current Organism:
Mitsuokella multacida
NCBI taxonomy Id: 500635
Other names: M. multacida DSM 20544, Mitsuokella multacida DSM 20544, Mitsuokella multacida NCTC 10934, Mitsuokella multacida str. DSM 20544, Mitsuokella multacida strain DSM 20544
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