STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX67968.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
EEX67969.1
Cyclic nucleotide-binding domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.775
EEX67967.1
SUF system FeS assembly protein, NifU family; Psort location: Cytoplasmic, score: 8.96.
       0.530
sufB
FeS assembly protein SufB.
       0.509
EEX67965.1
SufB/sufD domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.509
sufS
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.509
EEX68250.1
NLPA lipoprotein.
 
 
  0.506
sufC
FeS assembly ATPase SufC; Psort location: CytoplasmicMembrane, score: 7.88.
       0.506
nifJ
Pyruvate synthase.
    
 0.496
EEX68252.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.477
EEX68577.1
Isochorismatase family protein.
  
 
  0.439
Your Current Organism:
Mitsuokella multacida
NCBI taxonomy Id: 500635
Other names: M. multacida DSM 20544, Mitsuokella multacida DSM 20544, Mitsuokella multacida NCTC 10934, Mitsuokella multacida str. DSM 20544, Mitsuokella multacida strain DSM 20544
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.