STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEX67747.1Hydrolase, carbon-nitrogen family; Psort location: Cytoplasmic, score: 8.96. (259 aa)    
Predicted Functional Partners:
rfaE
Bifunctional protein RfaE, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
 
 
 
  0.834
EEX67934.1
Pyridine nucleotide-disulfide oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
  
 0.744
nifJ
Pyruvate synthase.
  
 
  0.717
EEX67933.1
4Fe-4S binding domain protein; Belongs to the glutamate synthase family.
    
  0.654
EEX68939.1
Amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.647
EEX68020.1
Tat pathway signal sequence domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
  0.646
EEX68115.1
Aminotransferase, class III; Psort location: Cytoplasmic, score: 8.96; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.630
EEX70240.1
Hydrolase, carbon-nitrogen family.
  
  
 
0.626
EEX68776.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; Psort location: Cytoplasmic, score: 9.26; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.622
EEX67746.1
Hypothetical protein.
       0.568
Your Current Organism:
Mitsuokella multacida
NCBI taxonomy Id: 500635
Other names: M. multacida DSM 20544, Mitsuokella multacida DSM 20544, Mitsuokella multacida NCTC 10934, Mitsuokella multacida str. DSM 20544, Mitsuokella multacida strain DSM 20544
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