STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CitCPutative [citrate (pro-3S)-lyase] ligase; KEGG: sbo:SBO_0483 4.6e-72 citC; citrate lyase synthetase K01910; Psort location: Cytoplasmic, score: 8.96. (242 aa)    
Predicted Functional Partners:
citG
triphosphoribosyl-dephospho-CoA synthase CitG; KEGG: sec:SC0648 4.0e-80 citG; putative modifier of citrate lyase protein K05966; Psort location: Cytoplasmic, score: 8.96.
  
 0.951
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
  
 0.939
citE
KEGG: ssn:SSO_0568 1.1e-130 citE; citrate lyase beta chain; acyl lyase subunit K01660:K01644; Psort location: Cytoplasmic, score: 9.97; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.938
citF
Citrate lyase, alpha subunit; KEGG: stm:STM0621 1.0e-209 citF; bifunctional citrate lyase alpha chain/citrate-ACP transferase K01037:K01643; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.936
citX
holo-ACP synthase CitX; KEGG: ece:Z0758 6.7e-39 ybdU; hypothetical protein K05964; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.854
EFB73498.1
KEGG: spt:SPA2110 1.3e-16 citC; [citrate (pro-3S)-lyase] ligase K01910.
  
     0.720
dpiB
Sensor kinase DpiB; KEGG: ecc:c0710 3.8e-171 citA; sensor kinase dpiB K07700; Psort location: CytoplasmicMembrane, score: 7.88.
 
   
 0.556
dpiA
Transcriptional regulatory protein DpiA; KEGG: btk:BT9727_0488 1.0e-26 response regulator K07703; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.496
Your Current Organism:
Providencia rustigianii
NCBI taxonomy Id: 500637
Other names: P. rustigianii DSM 4541, Providencia rustigianii DSM 4541, Providencia rustigianii str. DSM 4541, Providencia rustigianii strain DSM 4541
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.