STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MetI_1ABC transporter, permease protein; KEGG: baa:BA_0884 2.9e-47 binding-protein-dependent transport systems inner membrane component K00294; Psort location: CytoplasmicMembrane, score: 10.00. (222 aa)    
Predicted Functional Partners:
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.999
MetQ_1
NLPA lipoprotein.
 
 0.998
MetI_2
ABC transporter, permease protein; KEGG: baa:BA_0884 1.8e-45 binding-protein-dependent transport systems inner membrane component K00294; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.906
EFB72216.1
Alkylhydroperoxidase domain protein, Avi_7169 family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.782
EFB72217.1
Hypothetical protein; KEGG: rde:RD1_0284 5.6e-90 oxidoreductase, putative K00100.
       0.775
metA
Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.
  
    0.522
EFB72220.1
Hypothetical protein.
       0.423
EFB72221.1
TrkA C-terminal domain protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.423
Your Current Organism:
Providencia rustigianii
NCBI taxonomy Id: 500637
Other names: P. rustigianii DSM 4541, Providencia rustigianii DSM 4541, Providencia rustigianii str. DSM 4541, Providencia rustigianii strain DSM 4541
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.