STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC57706.1SNARE-like domain protein; KEGG: pmj:P9211_17501 3.5e-05 DedA family alkaline phosphatase-like protein; Psort location: CytoplasmicMembrane, score: 10.00. (255 aa)    
Predicted Functional Partners:
EFC54019.1
SNARE-like domain protein; KEGG: pmg:P9301_18161 8.2e-12 dedA; DedA family alkaline phosphatase-like protein K01077; Psort location: CytoplasmicMembrane, score: 9.46.
 
   
 0.798
EFC55918.1
SNARE-like domain protein; KEGG: cco:CCC13826_1307 4.3e-15 yihK; GTP-binding protein; Psort location: CytoplasmicMembrane, score: 9.46.
  
   
 0.663
araC
Arabinose operon regulatory protein; KEGG: sax:USA300HOU_0113 4.6e-09 xylan 1,4-beta-xylosidase; Psort location: Cytoplasmic, score: 9.97.
     
 0.572
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
 0.443
nifJ
KEGG: ent:Ent638_2136 0. pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K03737 putative pyruvate-flavodoxin oxidoreductase.
     
 0.423
EFC57708.1
Hypothetical protein.
       0.410
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.