STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspJGeneral secretion pathway protein J. (225 aa)    
Predicted Functional Partners:
gspI
General secretion pathway protein I.
 
 0.999
gspK
General secretion pathway protein K.
 
 
 0.996
EFC57972.1
Prepilin-type cleavage/methylation N-terminal domain protein.
 
 0.989
gspG
General secretion pathway protein G.
 
 
 0.986
gspD
General secretion pathway protein D; Psort location: OuterMembrane, score: 10.00.
  
 0.972
gspC
General secretion pathway protein C; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.970
gspE
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
   
 0.928
gspL
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
   
 0.917
gspF
General secretion pathway protein F; Psort location: CytoplasmicMembrane, score: 9.46.
 
  
 0.916
EFC57978.1
Bacterial peptidase A24, N-terminal domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.836
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.