STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiDUbiD family decarboxylase; Catalyzes the reversible decarboxylation of aromatic carboxylic acids. (484 aa)    
Predicted Functional Partners:
EFC54454.1
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase.
 
  
 0.884
ubiX
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
  
 0.874
ubiA
4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
 
  
 0.682
EFC58109.1
Transcriptional regulator, AraC family; KEGG: pmy:Pmen_2641 3.7e-25 ftrA; transcriptional activator FtrA; K00356 NADH dehydrogenase.
       0.544
EFC58108.1
KEGG: slo:Shew_0737 3.2e-05 MarR family transcriptional regulator; K03828 putative acetyltransferase.
       0.532
EFC54589.1
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; KEGG: ent:Ent638_3325 4.3e-196 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     
 0.523
EFC53608.1
FMN reductase; KEGG: sei:SPC_4087 4.1e-97 ubiB; NAD(P)H-flavin reductase; K03180 NAD(P)H-flavin reductase K05368.
  
    0.472
Your Current Organism:
Enterobacter cancerogenus
NCBI taxonomy Id: 500639
Other names: E. cancerogenus ATCC 35316, Enterobacter cancerogenus ATCC 35316, Enterobacter cancerogenus str. ATCC 35316, Enterobacter cancerogenus strain ATCC 35316
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